PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01260
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 389aa    MW: 44704.5 Da    PI: 5.0213
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01260genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19180230256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  OIT01260 180 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 230
               59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MDCDNKGRDF DDNTFERQQR RPEASISQRR FKKIRSPERQ YSYSQSSSYS HQQLSQSSLP  60
YNNPISMSFP PPPSSKLVFP FSFDATQQST ENLYQIRPNT TPLFPPQYQN QQQMISFSPQ  120
QCPYPPYFAG QSQNQQQLLQ YWNETLNLSP RGRMMMMSRL GQDSKGLFRP QLQPINTTKL  180
YRGVRQRHWG KWVAEIRLPR NRTRLWLGTF DTAEDAAMAY DREAFKLRGE NAKLNFPELF  240
LGKDREGPSI ESVESKQPDQ ESESLQLEPL NIELLPPPPP PPEVDNQDED SGIGSSEVTA  300
CDEVQGVSLQ STELVWGENE MAEAWFNAIP AGWGPGSPVW DDLDTNNNFI FPPNFHFGNV  360
HTHNSDPHNQ HIHDNTDPSS PSCPMRPFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-62ERF family protein