PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01240
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 404aa    MW: 45594 Da    PI: 8.1196
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01240genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-19242290355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  OIT01240 242 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYILRG 290
               8******9.**********955...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MENQSPKSES YMQKELPTCY KEVAIESLSR YFKNPHILEG LNDESSLTSF PNMKEILVSS  60
SDSTKFSEFF PLNFLQNDQG NNNSIIPLNN FLESFHHHNQ VSDHQTCSSP TSLSSNYPTL  120
GLFLKEPTIL EISKRAEESL NNKSHKTSAA IFPMSSLDES QIHQQQQAAA TTSTTNWLKM  180
NQTLTNCTTT KGFSDYWLST TKTQPMKITT GSRKSSLHYN QGNQKSSSSS SSLIATSQGK  240
LFRGVRQRHW GKWVAEIRLP RNRTRVWLGT FDTAEEAAIA YDTAAYILRG DYAHLNFPHL  300
KNQLKANSIN GNTAALLEAK IRAISSQTKK TNDHESKQVL LVDDSRIKNV ITQNQEMENS  360
EKKVKNINQE KLLLENNIDG VQLSRMPSLD MDMIWDALLV SDSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-61ERF family protein