PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00775

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 482aa MW: 54661.2 Da PI: 8.3414

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00775	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.7	2e-11	432	480	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+t E+e l +v+++G g+W++I t ++Rt+ ++k++w+++ OIT00775 432 KRWSTIEEETLRSGVQKYGVGNWRLIFDTYHeifENRTPVDLKDKWRNL 480 69*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDMDISRWIL EFVLWQPLED TIFNALIGVL PLPNEDSRLK KALILRKIQS EISNGSVSEK 60 ILEFLEVMEE LYTQEGIESS EAMKTAYCAV AVDCTVRFLN NKSEKVNYFE AVKRIWKQRI 120 NNLEKVENVG VVSEELWKWR DEIEAALWED RRCENVIMRS KSISAVVAVK GFVKEAKERI 180 GPPFLEVVAE TLRRDNAVKA YLGLENKEER GERIESLSIA GQDLTCCNHD KEANKRNALR 240 KRKHVAFKRT RGTTTAGVCK GVKIADSAEP GVEASRVQED LLHTPKIDKA QEALKLSSLE 300 LRAGVKDPLP EALELAETLM SLGRDSSAQQ PAENENGRAP HLVVDSNGVV QANGGNEDDQ 360 LIGLQNAAPK PSIMARNSTA RTFEWNDSID NLSEGSPSSS GRRFTLPTPR RTKVSPLKKY 420 EFKKFTKRRK SKRWSTIEEE TLRSGVQKYG VGNWRLIFDT YHEIFENRTP VDLKDKWRNL 480 TS

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDMDISRWIL EFVLWQPLED TIFNALIGVL PLPNEDSRLK KALILRKIQS EISNGSVSEK  60
ILEFLEVMEE LYTQEGIESS EAMKTAYCAV AVDCTVRFLN NKSEKVNYFE AVKRIWKQRI  120
NNLEKVENVG VVSEELWKWR DEIEAALWED RRCENVIMRS KSISAVVAVK GFVKEAKERI  180
GPPFLEVVAE TLRRDNAVKA YLGLENKEER GERIESLSIA GQDLTCCNHD KEANKRNALR  240
KRKHVAFKRT RGTTTAGVCK GVKIADSAEP GVEASRVQED LLHTPKIDKA QEALKLSSLE  300
LRAGVKDPLP EALELAETLM SLGRDSSAQQ PAENENGRAP HLVVDSNGVV QANGGNEDDQ  360
LIGLQNAAPK PSIMARNSTA RTFEWNDSID NLSEGSPSSS GRRFTLPTPR RTKVSPLKKY  420
EFKKFTKRRK SKRWSTIEEE TLRSGVQKYG VGNWRLIFDT YHEIFENRTP VDLKDKWRNL  480
TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	8e-21	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIT00775