PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00132

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 457aa MW: 49712.1 Da PI: 6.7995

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00132	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.6	1.2e-27	171	225	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ OIT00132 171 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 225 5689***************.******************************86 PP
2	Myb_DNA-binding	37.7	4.7e-12	174	223	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ OIT00132 174 VDWTPELHRRFVQAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 223 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MLAVSSLSNT RNKDERGKEM ESFTIGGGDD FPDFMGENLL DSIDFDDLFV GINDGDLLPD 60 LEMDAEIFAE FSVSSGDESD VNNYNISTPT TIKNVEQESC LRKEVEKASS VSASDLGSGL 120 TSLNYQGEEI VSTQKSEESA PPVNQNPLHK ESDKGKKSSA QSKNNPQGKR KVKVDWTPEL 180 HRRFVQAVEQ LGVDKAVPSR ILEIMGIDCL TRHNIASHLQ KYRSHRKHLL AREAEAASWS 240 QRRQIYGGAG GGGGGGKREM NPWPAPTIGF PPPMATPMPH FRPLHVWGHP SVEQSYMHMW 300 PKHLAPSPSP HQHPSPAAWP PAVHPPPHLH PADPSFWHPH HQRVPNSLTP GTTYFPAPIA 360 PTRYPAPHSV PGIPPPAAMY KVDPGIGVRT AVAGAGQPLP KPPCDFHPSK ESIDAAIGDV 420 LSKPWLPLPL GLKPPAVDSV LGELQRQGVP KIPPTCA

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MLAVSSLSNT RNKDERGKEM ESFTIGGGDD FPDFMGENLL DSIDFDDLFV GINDGDLLPD  60
LEMDAEIFAE FSVSSGDESD VNNYNISTPT TIKNVEQESC LRKEVEKASS VSASDLGSGL  120
TSLNYQGEEI VSTQKSEESA PPVNQNPLHK ESDKGKKSSA QSKNNPQGKR KVKVDWTPEL  180
HRRFVQAVEQ LGVDKAVPSR ILEIMGIDCL TRHNIASHLQ KYRSHRKHLL AREAEAASWS  240
QRRQIYGGAG GGGGGGKREM NPWPAPTIGF PPPMATPMPH FRPLHVWGHP SVEQSYMHMW  300
PKHLAPSPSP HQHPSPAAWP PAVHPPPHLH PADPSFWHPH HQRVPNSLTP GTTYFPAPIA  360
PTRYPAPHSV PGIPPPAAMY KVDPGIGVRT AVAGAGQPLP KPPCDFHPSK ESIDAAIGDV  420
LSKPWLPLPL GLKPPAVDSV LGELQRQGVP KIPPTCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	5e-87	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT00132