PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99866
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 361aa    MW: 40442.8 Da    PI: 6.3001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99866genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.8e-062162561055
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               r RR+++ ++   L +llP++     kK++ a++L +A +Y+k Lq
  OIS99866 216 RIRRQKLSEKTRSLEKLLPWD-----KKMDTATMLGEAYKYVKFLQ 256
               89******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MERKPLLQPE FNAGEALLPL MASDEAFING LYNGLSYQSV LSLSLDHYNH GEEVKPLSLS  60
YFQPSLAKDM PYAAAASQMQ QSSAAFDFST TRDFPWVKET ENILDADQKL KLPKLEPVTD  120
NLQLYPYSNN EIFLNEPPFN YFSNGISDDS GLGYGRLPDL RCLEMPNYLD FHLGDSSSTV  180
NGVEPVSVNS QVLMSNQLST MPKSCKQSAY GSSTTRIRRQ KLSEKTRSLE KLLPWDKKMD  240
TATMLGEAYK YVKFLQAQVR VLQSMPVLVE GGASSSSSGS EDRNGKSSYV NEVKANSFYG  300
PLARLNRQQL LQVVLNSPVA QTYLYSKGCC VYSAEQLLQL RKIAQRDALY RQTLFYSGMF  360
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.11e-16bHLH family protein