PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98859 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 28403.6 Da PI: 9.9456 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.6 | 8.1e-07 | 86 | 132 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er RR++ ++++ L +llP +K +K +i++ A I++Lq OIS98859 86 KHMIKERIRREKQKQSYLDLHKLLPMG-----TKGEKNAIVQTAASRIQELQ 132 68899********************97.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEEFFQVQSS QANNGEVLWF ENEAFLVNQS AFVSFRNQSI EGFGVSGYGN VSANHRNMNK 60 RMMEFLKKSW SPKIGEVKME REKVHKHMIK ERIRREKQKQ SYLDLHKLLP MGTKGEKNAI 120 VQTAASRIQE LQKYKGSLKK RNDELQMILA DSKKEEFEKA KIKVKINYPI SGVDSMLEVL 180 KCLKNCGTKA NAIQSSFSQQ EFSSILEIET KIGAAEVEKA VQNTLFETER NFRAHQLPMT 240 WLASATE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 8e-41 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98859 |