PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98187 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | SRS | ||||||||
Protein Properties | Length: 200aa MW: 22957.5 Da PI: 8.3918 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 185.6 | 2e-57 | 9 | 148 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletss 104 +++CqdCGnqakkdC + RCRtCCks+gf+C+thvkstW+p+++rr r++ l++ +++++++++++ + ++++ + + ++ e ++ OIS98187 9 SNSRCQDCGNQAKKDCPYLRCRTCCKSQGFQCQTHVKSTWIPVSRRRPRHHLLHTIQQQQQQQQQKQLQVNPKR-----------YRENDNNLAAGGEEED 98 6789*********************************************9999988666654443333333333...........2333333444567788 PP DUF702 105 lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 lP+e+s +avfrcvrvss d+ +++aYqt+v+i+GhvfkGiLydqG+e+ OIS98187 99 LPTELSLPAVFRCVRVSSTDNVVDQYAYQTSVKIAGHVFKGILYDQGPET 148 ************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MMREEGISSN SRCQDCGNQA KKDCPYLRCR TCCKSQGFQC QTHVKSTWIP VSRRRPRHHL 60 LHTIQQQQQQ QQQKQLQVNP KRYRENDNNL AAGGEEEDLP TELSLPAVFR CVRVSSTDNV 120 VDQYAYQTSV KIAGHVFKGI LYDQGPETET HYTNMARESS SNGFQQEQLT TNSTQPLPSY 180 PSPFNNFMPG TQFFQYPKSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 5e-53 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98187 |