PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98026 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 225aa MW: 26130.3 Da PI: 7.9358 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79.3 | 4.1e-25 | 113 | 174 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ ++++pr+Y+rCt++ gC++ k+v+r +e+p ++ +tY g+H+++ OIS98026 113 VDDGHAWRKYGQKHILNAKYPRNYFRCTHKfdqGCEANKQVQRIQENPPLFRVTYYGHHTCK 174 59***************************9999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MESENYTQSD LEKLTEKLNR GRELTRRLRE MIKKPEADVG DVLTEDLVGK IMSSFSETIS 60 ILRSNEFSEV SQIVKSTEDS SGSCKTSSMK DRRGRYKRRK TLETTIKETS TLVDDGHAWR 120 KYGQKHILNA KYPRNYFRCT HKFDQGCEAN KQVQRIQENP PLFRVTYYGH HTCKTFPKVS 180 QMICDSPTHD EDSSVLLNFN STNNHHHFLD LMVGTVEFAD LSFEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 8e-43 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98026 |