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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIS97809 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 328aa MW: 38158.4 Da PI: 6.3916 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 172.1 | 1.7e-53 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
+ppGfrFhPt+eelv +yLk+k+++ k++l +vi+++d+y++ePwd++ ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k++
OIS97809 7 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVITDIDLYRIEPWDIEGrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLS-KEK 105
69****************************.9***************952432234677**************************************.999 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+g++ktLvfykgrap+g+k+dW+mheyrl
OIS97809 106 IIGMRKTLVFYKGRAPNGRKSDWIMHEYRL 135
9***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 328 aa Download sequence |
MEMDSCVPPG FRFHPTEEEL VGYYLKRKIN SLKIDLDVIT DIDLYRIEPW DIEGRCKLGY 60 EEQNEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV LSKEKIIGMR KTLVFYKGRA 120 PNGRKSDWIM HEYRLQSSEH APPQEEGWVV CRAFKKPTPN KQPCLDLAWQ NSYYIRGTNT 180 TYRPSSSLSE IPSPMHQPFN NAFSHATNFH QFTFNPSHDH QNMIINSSQN YFENQLAELP 240 QLDSPTISTS LCTIDKSLGE QNYTANNEDD REEEKHSNGI NNSQYYGDWK NFDTLIDPPS 300 HSFNNPPLLN RDESHNHISH LLECLPDL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G71930.1 | 1e-107 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIS97809 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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