PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97235

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 729aa MW: 80502.5 Da PI: 7.2051

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97235	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	439	476	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + OIS97235 439 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 476 554458******************************88 PP
2	BELL	119.7	1.3e-38	300	371	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+s+l+eV++rY+qy++q+q++++sFe++ag+gsak+Yt+lAl++iS++FrcLkdai++qi OIS97235 300 QRQELQMKKAKLISMLDEVEQRYRQYHHQMQIIVASFEEAAGIGSAKSYTQLALHTISKQFRCLKDAITGQI 371 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MAMYYQGSSE IQADGLQTLY LMNPNYIGYT DTQQQQQQQQ QHLQQANMFF LNSGNAGNLP 60 HGQLPSQAHT QHFVGVPLQT STFQDPSRPS VHEVSASHHG LLQRLWSSNG QNSGGGGGNE 120 SQSHIPSAVV SPNSGGGTTT DFASQLGFQR PGLVSPTQQH QGLSLSLSPQ QQQQMINFRS 180 FPLDHHEISP HNNHQVGILS SPSPRTNTNN DHIRGSGASS SSFSNGMIVG SKYLKAAQEL 240 LDEVVNVGKS TKEVGAKEKD ELLDNELMPL GSDVAAAAPT SGSGESSSQK NIVAELTTVQ 300 RQELQMKKAK LISMLDEVEQ RYRQYHHQMQ IIVASFEEAA GIGSAKSYTQ LALHTISKQF 360 RCLKDAITGQ IKATSKSLGE EEINLGGKIE GSSSRLRFVD HHLRQQRALQ QLGMMQPNAW 420 RPQRGLPERA VSLLRAWLFE HFLHPYPKDS DKIMLAKQTG LTRSQVSNWF INARVRLWKP 480 MVEEMYLEEV KNNQEQHGLE ENSNKNEPNK EMCTKSSAPQ ETTNLRKDKQ ISSILQDASP 540 TEISSSTIST SPTGGSLPAQ AAGFSFIGSL NMENSTSERN NKKARNDMQN SSSSILSMET 600 EMKAGDRSKG EKFNSNNRQA RDQSYPLMTA YSTMGEFGRF NPEQQMATSF QGNGVSLTLG 660 LPPSENLVLS GSQHNFLPNQ NIGIEMGRIE THYNRMSNPQ PSHPNITYEN IDFQSGKRYA 720 AQLLPDFVS

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MAMYYQGSSE IQADGLQTLY LMNPNYIGYT DTQQQQQQQQ QHLQQANMFF LNSGNAGNLP  60
HGQLPSQAHT QHFVGVPLQT STFQDPSRPS VHEVSASHHG LLQRLWSSNG QNSGGGGGNE  120
SQSHIPSAVV SPNSGGGTTT DFASQLGFQR PGLVSPTQQH QGLSLSLSPQ QQQQMINFRS  180
FPLDHHEISP HNNHQVGILS SPSPRTNTNN DHIRGSGASS SSFSNGMIVG SKYLKAAQEL  240
LDEVVNVGKS TKEVGAKEKD ELLDNELMPL GSDVAAAAPT SGSGESSSQK NIVAELTTVQ  300
RQELQMKKAK LISMLDEVEQ RYRQYHHQMQ IIVASFEEAA GIGSAKSYTQ LALHTISKQF  360
RCLKDAITGQ IKATSKSLGE EEINLGGKIE GSSSRLRFVD HHLRQQRALQ QLGMMQPNAW  420
RPQRGLPERA VSLLRAWLFE HFLHPYPKDS DKIMLAKQTG LTRSQVSNWF INARVRLWKP  480
MVEEMYLEEV KNNQEQHGLE ENSNKNEPNK EMCTKSSAPQ ETTNLRKDKQ ISSILQDASP  540
TEISSSTIST SPTGGSLPAQ AAGFSFIGSL NMENSTSERN NKKARNDMQN SSSSILSMET  600
EMKAGDRSKG EKFNSNNRQA RDQSYPLMTA YSTMGEFGRF NPEQQMATSF QGNGVSLTLG  660
LPPSENLVLS GSQHNFLPNQ NIGIEMGRIE THYNRMSNPQ PSHPNITYEN IDFQSGKRYA  720
AQLLPDFVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	3e-94	TALE family protein

Link Out ? help Back to Top
Ensembl	OIS97235