PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97010
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family SRS
Protein Properties Length: 302aa    MW: 33175.7 Da    PI: 8.3542
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97010genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702201.62.3e-62982353154
    DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103
               +g+++CqdCGnqakkdC h+RCRtCC+ rgf+C+thvkstWvpaa+rrerqqq +            +++kr+r++   + s+l+ t+l++++s  e++ s
  OIS97010  98 QGNVNCQDCGNQAKKDCPHSRCRTCCRGRGFQCQTHVKSTWVPAARRRERQQQFSE-----------NHPKRPRDN--ISGSSLAYTRLPTTSSGLEVS-S 184
               7899**********************************************988654...........578999997..678899999999998886655.5 PP

    DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
               ++P+evss+avfrcv+vs+v+d+e+++aYqtav+igGh+fkG+LydqG+++
  OIS97010 185 HFPPEVSSPAVFRCVKVSGVEDAEQHYAYQTAVNIGGHIFKGMLYDQGPDQ 235
               5************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MSWFFSLGGG KEQEQEELAT NNLLLFKNEE IYNKGFKLWQ QLQQQRQQQN QEQDHVDFSI  60
CVGPASCSKP SNNNSNSCRS LGFRVMNMRG GGSSSGDQGN VNCQDCGNQA KKDCPHSRCR  120
TCCRGRGFQC QTHVKSTWVP AARRRERQQQ FSENHPKRPR DNISGSSLAY TRLPTTSSGL  180
EVSSHFPPEV SSPAVFRCVK VSGVEDAEQH YAYQTAVNIG GHIFKGMLYD QGPDQSRYSS  240
SGGGAGESSS QPLNFIAGAT AAASSQQQQG VSIAMFDPAS IYPNHQLSAF MAGTQFFPPP  300
RP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.12e-69SRS family protein