PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96845

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 460aa MW: 50211.4 Da PI: 6.2905

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96845	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.5e-31	247	305	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ OIS96845 247 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 305 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MCSKFQLQKT TMENNYQGDL ADIFLGSSGQ NISGANNITT TSGESSSTVA AAAVTDGWLG 60 QFPSHPINYS TSGIEEPSVQ DFGDPFCNLR DPLFHDLDMM PACSSLFTSN NDNNSNNNNN 120 TSLFEPKILE ETEMKSRPTG NIFSRMLQIS PTTKLAAAMS PCNSPMTAAV ALQPSSTVIA 180 GGGALVANDA IISPNSSKTC LVENSGLQIS SPRNTGIKRR KSQAKKVVCI PAPAPANSRQ 240 GGEIVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS 300 EHNHPWPTQR NALAGSTRSQ PNNSKHTTTS TSKNNTNSKD DEQNTSTAVS QVNISKVKEE 360 VAELQDLRHD HHHHQQLAVE MRDIEFSKDS YQPILPDSSS NNSHEDFFAD LVELEADPLN 420 LLFAKTLSED INEAGQKKAI DAFNLYDWSG NNNNKSQADP

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MCSKFQLQKT TMENNYQGDL ADIFLGSSGQ NISGANNITT TSGESSSTVA AAAVTDGWLG  60
QFPSHPINYS TSGIEEPSVQ DFGDPFCNLR DPLFHDLDMM PACSSLFTSN NDNNSNNNNN  120
TSLFEPKILE ETEMKSRPTG NIFSRMLQIS PTTKLAAAMS PCNSPMTAAV ALQPSSTVIA  180
GGGALVANDA IISPNSSKTC LVENSGLQIS SPRNTGIKRR KSQAKKVVCI PAPAPANSRQ  240
GGEIVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS  300
EHNHPWPTQR NALAGSTRSQ PNNSKHTTTS TSKNNTNSKD DEQNTSTAVS QVNISKVKEE  360
VAELQDLRHD HHHHQQLAVE MRDIEFSKDS YQPILPDSSS NNSHEDFFAD LVELEADPLN  420
LLFAKTLSED INEAGQKKAI DAFNLYDWSG NNNNKSQADP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-85	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIS96845