PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96643
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 320aa    MW: 36005.3 Da    PI: 4.7989
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96643genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-102442841055
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               r+RR+riN+++  L+ l+P+      +K+  +++Le+Av+Y+k Lq
  OIS96643 244 RKRRERINERLRILQNLVPNG-----TKVHISTMLEEAVQYVKFLQ 284
               9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MNPLAAMSEG EWSSFSGIYS TDQDAKFMSQ LPDNCSLTNE LPISTSLTSY ESTVSTNNSI  60
NFFSQGSSYS GCSSFPFSPL PSHESSYYPS HFRSNVMIRN DSSIIMDRYG MDVEGENIIS  120
SPSLTNYNAM IEVDDFLINQ DMSNDSMESG ENMPIEDKVD SPPDSSKKRS RRLLGDAIQN  180
NKRSVKLKKT SCEMDEENKT AILRQNSMIS CCSEDESVNV SHELTRKTRA SRGSATEPQS  240
LYARKRRERI NERLRILQNL VPNGTKVHIS TMLEEAVQYV KFLQLQIKLL GSDDLWMYAP  300
IAYNGMDIGL DLMKMDTPKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-41bHLH family protein