PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96355
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 335aa    MW: 38178.6 Da    PI: 10.206
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96355genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.31e-16126215198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               f k ++ps+v    +l lpk+f++ h   +  ++t++l de+g++++  +  ++++    l++GW++F  +++L  gD ++F+l++  +  l+v ++r
  OIS96355 126 FAKCMLPSNVAHGFWLHLPKSFCNMHL--PSHDTTVILVDEWGNEYKTSYLLERNG----LSAGWRGFSMSHRLLKGDLLIFRLIEPCK--LKVYIIR 215
               889********************8884..345679***************888888....***********************997444..5888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MEDRNLISVK PVTKRWKEGQ QKVGPHKLKP TSYSSASTST QTHPSPKIKR VQLDRKNMVP  60
KKPRSVKSKA KQVKSNHPRK AESSKLKGTN KRTRINDLYD DVEAKFSVME RAERVLSSLA  120
DEFPSFAKCM LPSNVAHGFW LHLPKSFCNM HLPSHDTTVI LVDEWGNEYK TSYLLERNGL  180
SAGWRGFSMS HRLLKGDLLI FRLIEPCKLK VYIIRVNGRD VVDAALCLMN FDALKKSTDL  240
DLAQKDNRKR KKAKRLVEPF YVDFSKPKEY IQNDSHSAVN LNVSPSVHRS ETNSEVLDSE  300
VPEGSDVINR LQSNEISCSE TSFLHDNPQN SISCR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248252RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-37B3 family protein