PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY14533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ZF-HD | ||||||||
Protein Properties | Length: 154aa MW: 16876.9 Da PI: 7.6829 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.9 | 2.4e-28 | 10 | 63 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 ++++Y+eCl+NhAaslG++a+DGCgEf+ + + ++ +l+CaACgCHRnFHR+ + RDY14533.1 10 SNCVYRECLRNHAASLGSYATDGCGEFTLD---DVSSPSLQCAACGCHRNFHRKVTC 63 5799*************************8...66789****************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MENSSSSSSS NCVYRECLRN HAASLGSYAT DGCGEFTLDD VSSPSLQCAA CGCHRNFHRK 60 VTCPAAEGLG GELMEYSGGG GGEGRVEAGG SKKRFRTKFS AEQKEKMLGF AEKLGWKLQR 120 KEVDDEIERF CRSVGVSRQA WIFLLDKSEK IYVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 4e-30 | ZF-HD family protein |