PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13844.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 273aa MW: 30635.8 Da PI: 9.7809

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.9e-05	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F+++ L H++ H RDY13844.1 82 FPCKFCNKKFPSSQALGGHQNAH 104 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MSKELFVEGV ESRKLKRKIE ETSSTCVIDS ELSLSLSLHN NKMVGESSSC KSLKSHKNSP 60 SFAPKLVKNT NHQVIVPKQH EFPCKFCNKK FPSSQALGGH QNAHRRERVL SRMDRDFNMG 120 NFGLGAHMCP YSTMAHHHPF RGPIPLCYGT NMHSMAHIST MPWRHFIPGY GNQGLNNTSI 180 SGQRFRMTNP WGVAVETPQN VYHRDVGFGS EHNLVPSLDV VNRATTAHSS LNDLLGNQYT 240 RNHLWKGDEG APDPTTWSYA SLLIKFVSLP LIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24625.1	2e-11	C2H2 family protein