PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY13404.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family LSD
Protein Properties Length: 125aa    MW: 13567.6 Da    PI: 8.3545
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY13404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD136.67.4e-123760124
     zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdt 24
                Cg+Cr+lLsY rGA++V+C++C+t
  RDY13404.1 37 CGSCRCLLSYQRGAKHVKCSCCQT 60
                ***********************8 PP
2zf-LSD144.82e-147599125
     zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                Cg+C +lL+YP+GA+ VRC++C++V
  RDY13404.1 75 CGSCAVLLMYPYGASQVRCSSCQFV 99
                ***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MEKEEDDEGP PPGWQPIPTQ PPPPPPPRPS GRAQMVCGSC RCLLSYQRGA KHVKCSCCQT  60
ANIVLEADQV GQVKCGSCAV LLMYPYGASQ VRCSSCQFVT EIGAHNKRSP WSVQQRKPTP  120
PKTGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21610.13e-41LSD family protein