PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY12579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WOX | ||||||||
Protein Properties | Length: 244aa MW: 27110.3 Da PI: 6.6228 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.5 | 3.5e-21 | 18 | 77 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ Le+l+++ ++psaee+++++++l +++ ++V++WFqN++a++++ RDY12579.1 18 SRWNPTKEQISMLENLYKQgIKTPSAEEIQQITARLraygHIEGKNVFYWFQNHKARQRQ 77 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.5 | 2.6e-37 | 17 | 79 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi +Le+lyk+G++tP++eeiq+ita+L++yG+ie+kNVfyWFQN+kaR+rqkq RDY12579.1 17 TSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQ 79 68***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MESGNEGMGG SNGVGGTSRW NPTKEQISML ENLYKQGIKT PSAEEIQQIT ARLRAYGHIE 60 GKNVFYWFQN HKARQRQKQK QETITFFNRF LHTPQPFFSP PICPNIHGIY APYCIGQAES 120 EIGFYPPHPK VVVPVGFKRN PSEKVVGTGM SNSNMICNGP LVYEGMQMQQ RISDCNLSYS 180 NQETLDLFPL HPTGILEGKT TTDQVSSADS STDTPSASPD INQDHGSPLN QPFFDFFTTS 240 GQAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 5e-52 | WOX family protein |