PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11864.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 451aa MW: 49399.9 Da PI: 6.5026

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134	5e-42	172	248	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC dls+ak+yhr+h+vCe+hsk+p v+++gle+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+q+ RDY11864.1 172 CQVEGCGLDLSSAKDYHRKHRVCETHSKSPRVVIAGLERRFCQQCSRFHALSEFDDKKRSCRRRLSDHNARRRKPQP 248 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MEWNAKSLGQ WDWEHLFFFN TKATENPRFQ QTDCGGEADR EINVGVLYPS GGSACSGSEL 60 IHASSSRSSK SASNNSSSNG DSKVSILTLE GSQDDSTGKK ELCNGEPVET SPAAVPSPVS 120 GEPLLTLKLG KRLYFEDVCT ASDSKKTSSF EAPISSGKKC KTSSQNFQHP SCQVEGCGLD 180 LSSAKDYHRK HRVCETHSKS PRVVIAGLER RFCQQCSRFH ALSEFDDKKR SCRRRLSDHN 240 ARRRKPQPDA IQLNPSALSS SPYGITGTFP SLGLVLHDQL GERAVKLDTI TVSKYVEFAD 300 GRQMMSPFGF SRSATNIAWQ DMQSNKLPQT KDFLPKPASI VSMLSDESSG LVTAVPGIED 360 PITSCDPNGT QDVNRALSLL STNSWGAYEP KTLSLEHSTI PSTEYWHTDQ QPPPSAMCIS 420 FSDSDSSNRF QDFHLLSAPP YESAFPCNQL D

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MEWNAKSLGQ WDWEHLFFFN TKATENPRFQ QTDCGGEADR EINVGVLYPS GGSACSGSEL  60
IHASSSRSSK SASNNSSSNG DSKVSILTLE GSQDDSTGKK ELCNGEPVET SPAAVPSPVS  120
GEPLLTLKLG KRLYFEDVCT ASDSKKTSSF EAPISSGKKC KTSSQNFQHP SCQVEGCGLD  180
LSSAKDYHRK HRVCETHSKS PRVVIAGLER RFCQQCSRFH ALSEFDDKKR SCRRRLSDHN  240
ARRRKPQPDA IQLNPSALSS SPYGITGTFP SLGLVLHDQL GERAVKLDTI TVSKYVEFAD  300
GRQMMSPFGF SRSATNIAWQ DMQSNKLPQT KDFLPKPASI VSMLSDESSG LVTAVPGIED  360
PITSCDPNGT QDVNRALSLL STNSWGAYEP KTLSLEHSTI PSTEYWHTDQ QPPPSAMCIS  420
FSDSDSSNRF QDFHLLSAPP YESAFPCNQL D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	245	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	6e-56	SBP family protein