PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY11717.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26145.3 Da PI: 5.9519 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.9 | 4.3e-17 | 67 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ ++Wv+eIr+p++ + r+++g++ t+e+Aa+a++ a ++l g RDY11717.1 67 PVYRGVRQRN-GNKWVCEIREPKK---KSRIWVGTYPTPEMAARAHDVAVLALSG 117 68*****999.9*********854...6*********************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MDFENIESPG SSSVSSQSST HSQLLSQCTP TNPNQLWDSS NPQPSDHTNP SHKRKAGRKK 60 FKETRHPVYR GVRQRNGNKW VCEIREPKKK SRIWVGTYPT PEMAARAHDV AVLALSGTSA 120 KFNFPDSVSL LPLANSSSAI DIRAAAAKLN STFSSQEPCL VEEEKSPQGL LCSCLNISMH 180 ELQVARDNID ESEAMFFDEE AVYNMPEGLL ITPPSTKTAM DWDDIASPID LTLWPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 4e-40 | ERF family protein |