PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY10357.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 365aa    MW: 42499 Da    PI: 7.111
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY10357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.15.6e-1483122342
                 --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF   3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 
                 i n+  r++++ kR++ ++K  +EL++LC +e++ i++s+
  RDY10357.1  83 IANDCARKTSYMKRKKSLMKMVKELCTLCSIEACAIVYSP 122
                 889***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MLNYGHDSDM TTNLMERMTF SGTFECAKLI GTITQNKRPG LRDRWWQEKV QATTHFTCIS  60
FCFTHFVVSI IFMARRRIKN ALIANDCARK TSYMKRKKSL MKMVKELCTL CSIEACAIVY  120
SPYHCEPEIW PSESGVLNVV QKFRTLPEWM QTKKMLNQES FIAQSILKGD ERIRNLVKEN  180
KETEMTMFMY QCLNTGMIQP GNNMNTTDLN DLSSIIEHKL KEIGTRLDSL NVDEIIPYQL  240
QMPILASQLA MQTPAYNPQM QTLPYQPQPQ MQTLPYQPQP QPQMHNQTLP YQLQMQTLPY  300
QPQPEMQTQT LPYQPQVQTQ TLPYQSQLQT QTLPYQPQPQ MLNYDHGSDT TANLMESDLF  360
LDFLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-43M-type_MADS family protein