PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY09323.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 33681.5 Da PI: 8.1069 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.8 | 9.4e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++k+ Gg+ +W++ +r+ g+ R++k+c++rw +yl RDY09323.1 14 KGPWTAEEDEILASYIKKNGGHgSWRSLPRMAGLLRCGKSCRLRWTNYL 62 79*******************9***********99************97 PP | |||||||
2 | Myb_DNA-binding | 43.2 | 9e-14 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l ++++ lG++ W++Ia+ + gRt++++k+ w+++l RDY09323.1 68 RGSFTLEEEKLVIQLHGILGNR-WAAIASQLA-GRTDNEIKNLWNTHL 113 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGRTPCCDKK GLKKGPWTAE EDEILASYIK KNGGHGSWRS LPRMAGLLRC GKSCRLRWTN 60 YLRPDIKRGS FTLEEEKLVI QLHGILGNRW AAIASQLAGR TDNEIKNLWN THLKKRLKSM 120 GLDPKTHEPV GSSSSYPFQK AHASVSTRHM AQWESARLEA EARLSNESSR FTTNPSSFNK 180 TTDSDYFLRI WNSEVGEAFR NAHHHHHHSH KPDDNNINNK ITALCHSPLS AGSSSNKCES 240 NAQGTPSDLV KEELEWTTRG CDSSSSNDME DSSDTALQLL LDFPINNDMS FLEGNSFGSP 300 L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 119 | LKKRLKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-115 | MYB family protein |