PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY08216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 315aa MW: 34104.6 Da PI: 10.0559 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.6 | 2e-31 | 244 | 301 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ RDY08216.1 244 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHT 301 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MAVDLMTGYR SDNFTSKAEE NAVQEAASGL ESVEKLIRLL SQTRPQYNSS SPNPSNEIAM 60 DCNAVADVAV SKFKKVISLL GRTPTGHARF RRAPLPPPNQ TPQAQPPEPP ALFHATPLHQ 120 IPKTERSLHD SSSKTIHFSY PSAATSFISS LTGDADTKLH PSSSSPPAAT PFQITSLSHV 180 SSAGKPPLSS SSMKRKCSSE NLGSGKCGSS SSRCHCSKKS RKMRLKRVVR VPAISLKMAD 240 IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERALDDPAML VVTYEGEHNH 300 TLSAADATNL ILESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 4e-65 | WRKY family protein |