PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY07483.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 350aa MW: 37805.6 Da PI: 7.4215 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.4 | 5.7e-21 | 170 | 219 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrd + + +r++lg+f+tae Aa+a+++a+++++g RDY07483.1 170 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAARAYDEAALRFRG 219 8********.**********66.....56*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MAAPANNLNL SIVPVANPGE KGNEIDESEL FHEGMNNSAF STMQRLLFPG LNREREMSAM 60 VSALTHVVAG EVPSGDSAVG GAHDAVTPTI PSSSPTTSPL PSSSNYDVAT SSLKRSRELD 120 TSFSHAASSH AAPTSGEDLK KWRSSTREMG NAVYEYRRTG NEGREEGRRK YRGVRQRPWG 180 KWAAEIRDPF KAARVWLGTF DTAEAAARAY DEAALRFRGN KAKLNFPENV TLRQPQLTLS 240 NSPPNSLVSI TTSTDPLVHT QPHLPSQVPT NFSDYFQLPA FPTNLYDHRM FVTSSMASHL 300 QSSSSPPASL SSSSAFASSI TSSQDTSLSS FYSTQLPPWS SSAHSSSSSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64750.1 | 3e-17 | ERF family protein |