PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY06325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25731.1 Da PI: 6.5244 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.4 | 4.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+eys+ RDY06325.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSN 59 68***********************************************95 PP | |||||||
2 | K-box | 50.1 | 1.2e-17 | 93 | 172 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++L ke+ + + +R+l GedL+ L+++eLqqLe+ Le++l ++ +kK e ++++i +lq+k l een++L++ ++ RDY06325.1 93 NCSRLSKEVAEKSHRLRQLRGEDLQGLNIEELQQLERSLETGLGRVIEKKGERIMSEIADLQRKGMLLMEENERLKRHVA 172 5678888888888999************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYSNS 60 SMKEILERHH LHSKNLARLE QPSLELQLVE NSNCSRLSKE VAEKSHRLRQ LRGEDLQGLN 120 IEELQQLERS LETGLGRVIE KKGERIMSEI ADLQRKGMLL MEENERLKRH VADIIDGQRH 180 GGAESENFVM DEGQSSESVT YVCNSTGPPQ DYESSDTSLK LGLPYSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-118 | MIKC_MADS family protein |