PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY05506.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 469aa MW: 52356.1 Da PI: 7.9972

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY05506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.8	4e-40	174	250	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC dls+ak+yhr+h+vCe hsk+ +v+v+gle+rfCqqCsrfh l efDe+krsCrrrL++hn+rrrk+ RDY05506.1 174 CCQVEGCGLDLSSAKDYHRKHRVCESHSKSLKVVVAGLERRFCQQCSRFHGLLEFDEKKRSCRRRLSDHNARRRKPL 250 6**************************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MEWNAKSPPQ WEWEHLFFNT KPTENSKSQS PNWSGEANQE INFELFDASG VSGCSGSELI 60 HASSSRTSIS ASMNSSSNMG SKTSIFTFES SQDDSSGKKE LSKEEPLETS HAPEPSSVSG 120 EPLLTLKLGK RLYFEDVCPE NDSKNLSFSK DPVSSSSTGK KCKSNNGQSL QYPCCQVEGC 180 GLDLSSAKDY HRKHRVCESH SKSLKVVVAG LERRFCQQCS RFHGLLEFDE KKRSCRRRLS 240 DHNARRRKPL PEAVQSSQSA LSSVPCERRK QMSPFTFSRT ASNIACQKIH SSKLPQTKDF 300 LMKTAKANTV IPSIVTMLSN DSNISFTSKA FATKNINLGR IPLVGIEDSI NSSDPNATKD 360 YDRALSLLST NSWGSYDAKS ISLEHSNHTT SVAQPTSQRI PLASSEYWHT DHPLNSSMWI 420 SYSNSDDSNR FHEFQLLREP YESGLSYASI PICQGQDYFE NVLRRQNDK

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MEWNAKSPPQ WEWEHLFFNT KPTENSKSQS PNWSGEANQE INFELFDASG VSGCSGSELI  60
HASSSRTSIS ASMNSSSNMG SKTSIFTFES SQDDSSGKKE LSKEEPLETS HAPEPSSVSG  120
EPLLTLKLGK RLYFEDVCPE NDSKNLSFSK DPVSSSSTGK KCKSNNGQSL QYPCCQVEGC  180
GLDLSSAKDY HRKHRVCESH SKSLKVVVAG LERRFCQQCS RFHGLLEFDE KKRSCRRRLS  240
DHNARRRKPL PEAVQSSQSA LSSVPCERRK QMSPFTFSRT ASNIACQKIH SSKLPQTKDF  300
LMKTAKANTV IPSIVTMLSN DSNISFTSKA FATKNINLGR IPLVGIEDSI NSSDPNATKD  360
YDRALSLLST NSWGSYDAKS ISLEHSNHTT SVAQPTSQRI PLASSEYWHT DHPLNSSMWI  420
SYSNSDDSNR FHEFQLLREP YESGLSYASI PICQGQDYFE NVLRRQNDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	231	248	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	8e-60	SBP family protein