PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 170aa MW: 19981.4 Da PI: 9.7007 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.4 | 1.9e-28 | 27 | 72 | 2 | 47 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+ RDY05124.1 27 RIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLF 72 8*******************************************97 PP | |||||||
2 | K-box | 93.1 | 4.6e-31 | 86 | 169 | 1 | 84 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 y++++ +++++ ++e+++ e+akLk+++e Lq++qR+++G+dL+ Ls+keLq+Le+qL+++lk+iRs+Kn+l++e+i+el kk RDY05124.1 86 YAERQLVANDQPQSENWTLEHAKLKARLEVLQKNQRNFMGQDLDGLSIKELQNLEHQLDSALKHIRSRKNQLMYESISELHKKV 169 5677888899999********************************************************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MNRRGDSGSC WFASLSDSHS DREIWXRIEN KINRQVTFSK RRSGLLKKAH EISVLCDAEV 60 ALIVFSTKGK LFDMERILER YERYSYAERQ LVANDQPQSE NWTLEHAKLK ARLEVLQKNQ 120 RNFMGQDLDG LSIKELQNLE HQLDSALKHI RSRKNQLMYE SISELHKKVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-79 | MIKC_MADS family protein |