PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY02952.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 1214aa MW: 135802 Da PI: 8.262

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY02952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122.4	2.4e-38	1016	1117	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C aCk+lrrkCa dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l + RDY02952.1 1016 PCGACKFLRRKCAVDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQ 1112 7***********************99*****************************************************************99 PP DUF260 97 lkeel 101 +k++l RDY02952.1 1113 VKAQL 1117 99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1214 aa Download sequence
MSNPQNQKPW KAEYAKSGRS SCRTCKSPIA SETLRLGKMV QSSKFDGLMP MWHHAACILK 60 KANQIKLVED VENLESLRWE DQQKIRKYIE SGGGAGGATK SNSSAVKDTE GGIEVSQTSR 120 ATCRDCSQKI IKGEVRISTK PDGQGAKGLA WHHAKCLLEL SPSIKVDKLS GWNNLSSSDQ 180 SAVSDMAKKG CSMNKGGGSG TNIKTEEGKE STQHTSKGGI KRGKDADGER KSKVAKAKGE 240 MSAGSAVSVK NYNVPGEACD LENRLEAQSK ELWALKDDLK KHAATIELRE MLEANGQDST 300 GSELDLRDRW YADGMMFGGL GLCPICSGFL RYSGGMYRCN GYISEWSKCS YSTCEPKRIE 360 AKWKIPEETN NQYLKKWFKS QKGKKPVRIL PLPSPRKSAE SQITASQHQS SNSENLQDLK 420 VAICGLPNES IYFVLIFYEV VLQEKWKRKI DGIGGVFHAK VKKDTNCLVV GGALNDEAEM 480 RKARRMKIPI VREDYLIDCI ERKKRLPFDM YKVEKIGEAS SMVTIKVKGH SAVHEASGLQ 540 DSGHILEEGK SIYNTTLNMS DLSTGINSYY ILQIIQEDKG SDCYVFRKWG RVGNDKIGGN 600 KVEEMSKSDA ICEFKRLFYE KTGNPWEAWE QKTIQKQPGR FFPLDIDYGV NKQISKKKTN 660 ITDSILPHPL IELMKMLFNV ETYRAAMMEF EINMSEMPLG KLSKSNIQKG FEALTEIQNL 720 FKTSNSDPSV KESLLINASN RFFTVIPSIH PHIIRDEDDF KSKVKMLEAL QDIEIASRLV 780 GFDANSDDSI DDNYKKLHCD ISPLPHDSED FCLIEKFLHN THAPTHTDWS LELEEVFSLE 840 REGEFDKFAP YRDKLGNRML LWHGSRLTNF VGILSQGLRI APPEAPATGY MFGKGVYFAD 900 LVSKSAQYCF TDKKNPVGLM LLSEVALGNV YELKKAKYMD KPPEGKHSTK GLGKKMPHES 960 EFVKWKGDVT VPCGKPVSSN VKASELMYNE YIVYDTAQIN WDFFILNGNG SGSGSPCGAC 1020 KFLRRKCAVD CIFAPYFCSE QGPARFAAIH KVFGASNVSK LLLHIPAHDR CEAVVTIAYE 1080 AQARIRDPVY GCVSHIFALQ QQVACLQAQL MQVKAQLSQN LMESRNIENH QWPGNNNSVA 1140 GQAISHPFCP TYMNPISPQS SLESIDHSSI NDGMGMQDIQ SREDFPFQAS SKERSYNNND 1200 LGELQELALR MMRN

Sequence ? help Back to Top

Protein Sequence Length: 1214 aa Download sequence

MSNPQNQKPW KAEYAKSGRS SCRTCKSPIA SETLRLGKMV QSSKFDGLMP MWHHAACILK  60
KANQIKLVED VENLESLRWE DQQKIRKYIE SGGGAGGATK SNSSAVKDTE GGIEVSQTSR  120
ATCRDCSQKI IKGEVRISTK PDGQGAKGLA WHHAKCLLEL SPSIKVDKLS GWNNLSSSDQ  180
SAVSDMAKKG CSMNKGGGSG TNIKTEEGKE STQHTSKGGI KRGKDADGER KSKVAKAKGE  240
MSAGSAVSVK NYNVPGEACD LENRLEAQSK ELWALKDDLK KHAATIELRE MLEANGQDST  300
GSELDLRDRW YADGMMFGGL GLCPICSGFL RYSGGMYRCN GYISEWSKCS YSTCEPKRIE  360
AKWKIPEETN NQYLKKWFKS QKGKKPVRIL PLPSPRKSAE SQITASQHQS SNSENLQDLK  420
VAICGLPNES IYFVLIFYEV VLQEKWKRKI DGIGGVFHAK VKKDTNCLVV GGALNDEAEM  480
RKARRMKIPI VREDYLIDCI ERKKRLPFDM YKVEKIGEAS SMVTIKVKGH SAVHEASGLQ  540
DSGHILEEGK SIYNTTLNMS DLSTGINSYY ILQIIQEDKG SDCYVFRKWG RVGNDKIGGN  600
KVEEMSKSDA ICEFKRLFYE KTGNPWEAWE QKTIQKQPGR FFPLDIDYGV NKQISKKKTN  660
ITDSILPHPL IELMKMLFNV ETYRAAMMEF EINMSEMPLG KLSKSNIQKG FEALTEIQNL  720
FKTSNSDPSV KESLLINASN RFFTVIPSIH PHIIRDEDDF KSKVKMLEAL QDIEIASRLV  780
GFDANSDDSI DDNYKKLHCD ISPLPHDSED FCLIEKFLHN THAPTHTDWS LELEEVFSLE  840
REGEFDKFAP YRDKLGNRML LWHGSRLTNF VGILSQGLRI APPEAPATGY MFGKGVYFAD  900
LVSKSAQYCF TDKKNPVGLM LLSEVALGNV YELKKAKYMD KPPEGKHSTK GLGKKMPHES  960
EFVKWKGDVT VPCGKPVSSN VKASELMYNE YIVYDTAQIN WDFFILNGNG SGSGSPCGAC  1020
KFLRRKCAVD CIFAPYFCSE QGPARFAAIH KVFGASNVSK LLLHIPAHDR CEAVVTIAYE  1080
AQARIRDPVY GCVSHIFALQ QQVACLQAQL MQVKAQLSQN LMESRNIENH QWPGNNNSVA  1140
GQAISHPFCP TYMNPISPQS SLESIDHSSI NDGMGMQDIQ SREDFPFQAS SKERSYNNND  1200
LGELQELALR MMRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	502	528	RKKRLPFDMYKVEKIGEASSMVTIKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42430.1	8e-59	LBD family protein