PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY01110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 76aa MW: 8657.93 Da PI: 6.6735 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.6 | 3.2e-16 | 10 | 57 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lppGfrF P+deelv +yL kkv+++++ ++ ++d++++ePw+Lp RDY01110.1 10 LPPGFRFYPSDEELVLHYLYKKVTNEEVLK-GTLMDIDLHTCEPWQLPV 57 79************************9655.78**************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence |
MGLRDIGASL PPGFRFYPSD EELVLHYLYK KVTNEEVLKG TLMDIDLHTC EPWQLPVPSL 60 FAHKHGKLHI QNNSGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.2 | 4e-20 | NAC family protein |