PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00888.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

WRKY

Protein Properties

Length: 367aa MW: 40814.9 Da PI: 5.0466

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.6	2.5e-28	128	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+++pr+YYrCt++ gC ++k+v++s+edp ++eitY+g+H+++ RDY00888.1 128 LDDGYSWRKYGQKDILGAKYPRGYYRCTYRnvqGCLATKQVQKSNEDPMICEITYRGRHTCS 189 59*************************98989************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGENMKCEQA GLIDELVQGK ELAKQLSDHL FLAPSSSSHE TNEVLIEKIL STYEKALAML 60 NWKANVGESK ANNGGMMDSL SSFTNGSPKR EALEPVVKHK DVSKKRKTMP TWTEQVKVCL 120 GTAHDGPLDD GYSWRKYGQK DILGAKYPRG YYRCTYRNVQ GCLATKQVQK SNEDPMICEI 180 TYRGRHTCSQ ASHLTKAVAP PSKAKMGLGE NKHHTTTHQK NQPQEEKIEQ PQETILSFGS 240 PGVKIEDMIM DHKDDIFPSF CFSSPSIGSE NEDNNMFPYA MIEDNLMETF SPAFISPTTS 300 ESNMFCLSPC PWESTGLGQS VQSSESDITD TVSAPTSVSN SPIMDLDLFL KFDFDTDFPI 360 NTTELCT

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGENMKCEQA GLIDELVQGK ELAKQLSDHL FLAPSSSSHE TNEVLIEKIL STYEKALAML  60
NWKANVGESK ANNGGMMDSL SSFTNGSPKR EALEPVVKHK DVSKKRKTMP TWTEQVKVCL  120
GTAHDGPLDD GYSWRKYGQK DILGAKYPRG YYRCTYRNVQ GCLATKQVQK SNEDPMICEI  180
TYRGRHTCSQ ASHLTKAVAP PSKAKMGLGE NKHHTTTHQK NQPQEEKIEQ PQETILSFGS  240
PGVKIEDMIM DHKDDIFPSF CFSSPSIGSE NEDNNMFPYA MIEDNLMETF SPAFISPTTS  300
ESNMFCLSPC PWESTGLGQS VQSSESDITD TVSAPTSVSN SPIMDLDLFL KFDFDTDFPI  360
NTTELCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24110.1	4e-50	WRKY family protein