PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY00457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WOX | ||||||||
Protein Properties | Length: 221aa MW: 25421.5 Da PI: 9.0017 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.8 | 5e-20 | 19 | 78 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ Le+l+ + r+p+ae++++++++l +++ ++V++WFqN++a++++ RDY00457.1 19 SRWSPTKEQISMLENLYMEgIRTPNAEQIQHITSRLkaygHIEGKNVFYWFQNHKARQRQ 78 6*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.1 | 1.4e-36 | 18 | 79 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+Pt+eQi +Le+ly +G+rtPn+e+iq+it++L++yG+ie+kNVfyWFQN+kaR+rqk RDY00457.1 18 VSRWSPTKEQISMLENLYMEGIRTPNAEQIQHITSRLKAYGHIEGKNVFYWFQNHKARQRQK 79 68***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MESHSAEIET GKRVTHSVSR WSPTKEQISM LENLYMEGIR TPNAEQIQHI TSRLKAYGHI 60 EGKNVFYWFQ NHKARQRQKL KQQSIRYSNR FLHTSHPIPQ NVVYSPYCLQ QSGIMNFYSQ 120 QPMVVASGGI SSRIDNVVPF GIRRMCDGPQ IYQQLQQSAM DYNLSMSNRE ALTLFPLHPT 180 GILEEKTTNQ VFSLAVDEHG RPGNQQSSDF FTSEQGSRET H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 5e-44 | WOX family protein |