PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99990.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 459aa MW: 48799.1 Da PI: 9.8623

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX99990.1 59 FVCEICNKGFQRDQNLQLHRRGH 81 89*******************88 PP
2	zf-C2H2	15.9	3.7e-05	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ RDX99990.1 135 WKCERCSKKYAVQSDWKAHMKTC 157 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MKSATMREPQ NPSIHSPALD STPQPLPPPK KKRNLPGMPD PDAEVIALSP KTLLATNRFV 60 CEICNKGFQR DQNLQLHRRG HNLPWKLRQR GTNEPRKKAY VCPEPSCVHH NPARALGDLT 120 GIKKHFCRKH GEKKWKCERC SKKYAVQSDW KAHMKTCGTR EYRCDCGTLF SRRDSFITHR 180 AFCDVLAQES ARAQAQVQVQ VQVQAQAQGV VASSPPTPPL TPTASVVSPT LSIQSSEIPE 240 KPRKASPTSS NATCLANVVA TSSTRSSSTG CSSSVFASVL ASSSTGATPS QSQSPSTSSF 300 SNLISRLART DYPNNMREPT SLSLSTPLYL SNNDPPHYTA SPQQPALSAT ALLQKAAQMG 360 SSNASLLRGL GLATTSSSSS FVKQENHPVV DSLGLGLPCG SGDVTDAMMG SSPSFVGQPM 420 TRDLLGLSIG GGASRGGLSA LLTSFGGNFD SSAEGGVPP

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MKSATMREPQ NPSIHSPALD STPQPLPPPK KKRNLPGMPD PDAEVIALSP KTLLATNRFV  60
CEICNKGFQR DQNLQLHRRG HNLPWKLRQR GTNEPRKKAY VCPEPSCVHH NPARALGDLT  120
GIKKHFCRKH GEKKWKCERC SKKYAVQSDW KAHMKTCGTR EYRCDCGTLF SRRDSFITHR  180
AFCDVLAQES ARAQAQVQVQ VQVQAQAQGV VASSPPTPPL TPTASVVSPT LSIQSSEIPE  240
KPRKASPTSS NATCLANVVA TSSTRSSSTG CSSSVFASVL ASSSTGATPS QSQSPSTSSF  300
SNLISRLART DYPNNMREPT SLSLSTPLYL SNNDPPHYTA SPQQPALSAT ALLQKAAQMG  360
SSNASLLRGL GLATTSSSSS FVKQENHPVV DSLGLGLPCG SGDVTDAMMG SSPSFVGQPM  420
TRDLLGLSIG GGASRGGLSA LLTSFGGNFD SSAEGGVPP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	98	KLRQRGTNEPRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-103	C2H2 family protein