PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX98856.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 412aa MW: 46678.4 Da PI: 9.6083

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX98856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.3	2.6e-15	125	219	2	82
trihelix 2 WtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 W e+l+Li+a++ ++er ++ + + +W++v ++++ + + rs++qC++kw+nl ++ykk+++ ++k +++ + + ++f RDX98856.1 125 WNITETLTLITAKKLDDERRLKTPhdptrpacstttrtSGELRWKWVENYCWNHDCLRSQNQCNDKWDNLLRDYKKVRDYDSKSQQPPHDNNKHF 219 999********966555554423455566677777799*************************************9999865544455554 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
YGSKGIINDP SLFALYCTQE YSSNSTVEPR AAKLHSTPLR TWHHSITDAL NHSPTPPTTK 60 QISLSNTVTI KLAHSFFTCS ISCQIKTMSE PSTTPLPPSH HHHHVPLIQG GATASQPREY 120 RKGNWNITET LTLITAKKLD DERRLKTPHD PTRPACSTTT RTSGELRWKW VENYCWNHDC 180 LRSQNQCNDK WDNLLRDYKK VRDYDSKSQQ PPHDNNKHFP SYWTLSKQQR KEQNLPSNMV 240 FEVYQAITEV LQRKQTPRQQ LQQQPAVTLL TSSSSTLPPP PPPLPPPPPP PLPPPPPPPI 300 TSTTPAVSER SESSGTEHSE DDDVSESKRR KVKNLGSSIM RSASVLARAL RSCEEKKEKR 360 HRELIELEQR RLQMEESRNE VHRQGIATLV AAVTNLSGAI QSLINSERHG QR

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

YGSKGIINDP SLFALYCTQE YSSNSTVEPR AAKLHSTPLR TWHHSITDAL NHSPTPPTTK  60
QISLSNTVTI KLAHSFFTCS ISCQIKTMSE PSTTPLPPSH HHHHVPLIQG GATASQPREY  120
RKGNWNITET LTLITAKKLD DERRLKTPHD PTRPACSTTT RTSGELRWKW VENYCWNHDC  180
LRSQNQCNDK WDNLLRDYKK VRDYDSKSQQ PPHDNNKHFP SYWTLSKQQR KEQNLPSNMV  240
FEVYQAITEV LQRKQTPRQQ LQQQPAVTLL TSSSSTLPPP PPPLPPPPPP PLPPPPPPPI  300
TSTTPAVSER SESSGTEHSE DDDVSESKRR KVKNLGSSIM RSASVLARAL RSCEEKKEKR  360
HRELIELEQR RLQMEESRNE VHRQGIATLV AAVTNLSGAI QSLINSERHG QR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	328	359	KRRKVKNLGSSIMRSASVLARALRSCEEKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-42	Trihelix family protein