PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX98719.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 299aa MW: 34111.8 Da PI: 8.4963

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX98719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.2	7e-06	136	155	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r n++ H+ RDX98719.1 136 FVCSICSKTFNRYNNMQMHM 155 89*****************9 PP
2	zf-C2H2	14.4	0.00011	220	242	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+ksF k + ++H +++ RDX98719.1 220 FMCRKCSKSFAVKGDWRTHEKNC 242 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MSFRECNVEN KNLCLQTPTF IEWLKPSSSL TTTSTPSSPS SLTQHELAQE TIQFLPFNHG 60 LQKDGFEVKE EKVEQVTVAL HIGLPNTGGP DDEEKKVFHV KEEEPLKKSF QGCSFNQERR 120 FWIPTPAQIL VGPMQFVCSI CSKTFNRYNN MQMHMWGHGS EFRKGPDSLK GTQPAAMLRL 180 PCYCCAQGCK NNINHPRAKP LKDFRTLQTH YKRKHGAKPF MCRKCSKSFA VKGDWRTHEK 240 NCGKLWYCTC GSDFKHKRSL KDHIRSFGKG HSPHPSLEGF VEDEKECVTG SDEDEVAHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-111	C2H2 family protein