PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX98534.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 849aa    MW: 92971 Da    PI: 6.1798
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX98534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.54.7e-182583357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  RDX98534.1 25 KYVRYTAEQVEALERVYTECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                56789****************************************************97 PP
2START160.21.5e-501643712204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l ++++
  RDX98534.1 164 IAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELVYTQT 261
                 789*******************************************************.7777777777***********999999999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l++s+ + ++
  RDX98534.1 262 YAPTTLAPaRDFWTLRYTTSLENGSLVVCERSLSGSGTGPNpaaAAQFVRAETLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQ 360
                 *********************************987777777899****************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k++ a+l++ +
  RDX98534.1 361 KMTIAALRYIR 371
                 ******99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 849 aa     Download sequence    
MAMAVAQHRE SSSSGSIDKH LDSGKYVRYT AEQVEALERV YTECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLSAM NKLLMEENDR LQKQVSQLVC  120
ENGFMRQQLH TTSAATTDAS CDSVVTTPQH TMRDANNPAG LLSIAEETLT EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFA ISQSCSGVAA RACGLVSLEP TKIAEILKDR PSWFRDCRSL  240
EVFTMFPAGN GGTIELVYTQ TYAPTTLAPA RDFWTLRYTT SLENGSLVVC ERSLSGSGTG  300
PNPAAAAQFV RAETLPSGYL IRPCDGGGSI IHIVDHLNLE AWSVPEVLRP LYESSKVVAQ  360
KMTIAALRYI RQIAQETSGE VVYGLGRQPA VLRTFSQRLS RGFNDAVNGF NDDGWSVLNC  420
DGAEDVIIAV NSTKNLSGTS NPASSLTFLG GILCAKASML LQNVPPAVLV RFLREHRSEW  480
ADFNVDAYAA ASLKAGTYAY PGMRPTRFTG SQIIMPLGHT IEHEEMLEVI RLEGHSLAQE  540
DAFVSRDIHL LQICSGIDEN AVGACSELIF APIDEMFPDD APLVPSGFRI IPLDAKPGDK  600
KDTVATNRTL DLTSGFEVGP ATTTGTDAST SQNTRSVLTI AFQFPFDSSL QDNVAVMARQ  660
YVRSVIASVQ RVAMAISPSG INPAVGAKLS PGSPEAVTLA HWICQSYRQV YSSLFYYLGS  720
DLLRSDSLVG DMMLKHLWHH QDAILCCSLK SLPVFIFANQ AGLDMLETTL VALQDITLDK  780
IFDESGRKAL CADFAKLMEQ GFAYLPAGIC MSTMGRHVSY DQAIAWKVLT GEDNTVHCLA  840
FSFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein