PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX94550.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 398aa MW: 43535.4 Da PI: 7.7414

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX94550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ RDX94550.1 6 WKCDKCSKKYAVQSDWKAHSKTC 28 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
HGEKKWKCDK CSKKYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAQE 60 SAREAPNLSS GIGNNQLYGN SDNMSLALSQ NMGPQQIHDQ SSDLLRFGGA RSGQFDHILP 120 PTLASPFRPS SHQTPPFFMP DSNLNQNYHE HQQGLISNKP FQGLIQLSEL NNNNNNTPSA 180 SNLFNLPFLS SNRGNNNDEH QHFNSTEGSN FFSESALNIG TDHQTSSTTA PSLFSTSLQN 240 STNNLCHMSA TALLQKAAQM GAASSSNNNN NSASSLLRTL ASKNEHHHHH HRPLTAANYG 300 TIFHNSVQDM INIPAFDAYD HHGINKEPKL SVGGSDRLTR DFLGVGGQNQ IVRNMSGASS 360 GRFSHQQQRG FNLSSLEADT NNNAAPSAQS FGAGGNFQ

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

HGEKKWKCDK CSKKYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAQE  60
SAREAPNLSS GIGNNQLYGN SDNMSLALSQ NMGPQQIHDQ SSDLLRFGGA RSGQFDHILP  120
PTLASPFRPS SHQTPPFFMP DSNLNQNYHE HQQGLISNKP FQGLIQLSEL NNNNNNTPSA  180
SNLFNLPFLS SNRGNNNDEH QHFNSTEGSN FFSESALNIG TDHQTSSTTA PSLFSTSLQN  240
STNNLCHMSA TALLQKAAQM GAASSSNNNN NSASSLLRTL ASKNEHHHHH HRPLTAANYG  300
TIFHNSVQDM INIPAFDAYD HHGINKEPKL SVGGSDRLTR DFLGVGGQNQ IVRNMSGASS  360
GRFSHQQQRG FNLSSLEADT NNNAAPSAQS FGAGGNFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	4e-41	C2H2 family protein