PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX94549.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family C2H2
Protein Properties Length: 417aa    MW: 45195 Da    PI: 8.8652
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX94549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000471335123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                +kC +C+k +  +s+ k H +t+
  RDX94549.1 13 WKCDKCSKKYAVQSDWKAHSKTC 35
                58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
KKHYSRKHGE KKWKCDKCSK KYAVQSDWKA HSKTCGTREY RCDCGTLFSR RDSFITHRAF  60
CDALAHESAR HPPNMNPLGT HHLYGTNHMS LGLGGQLQNQ ASTNSILSLG SAPKYEHLIS  120
PNLHHSSSFG VQSPPQSSFF MTDPNQAFQD LQSQQQGPLF SNKQLHGLMQ LPDLQGTTNN  180
NSTSASSVSS SANNTNLFNL TFFPNANTSG SIINDHQFNM SGGNNNNQGT ATLYSTNSPV  240
SSQVGSGLSS LFGNSSMQQD NMSLSPHMSA TALLQKAAQM GSTTTTNASS SLLRGAEDLG  300
MRSSMENEHS NHLRGLMNSL ANGNASIFGS VKGNENNLGH FHNVVEEPKK MSQNLGVCFG  360
GSDKLTLDFL GVGGMVRNMN NSGFSQREQQ HSMGTMSPLD PKLEPARANQ HFGTSTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02070.12e-37C2H2 family protein