PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX94549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 417aa MW: 45195 Da PI: 8.8652 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00047 | 13 | 35 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ RDX94549.1 13 WKCDKCSKKYAVQSDWKAHSKTC 35 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 417 aa Download sequence |
KKHYSRKHGE KKWKCDKCSK KYAVQSDWKA HSKTCGTREY RCDCGTLFSR RDSFITHRAF 60 CDALAHESAR HPPNMNPLGT HHLYGTNHMS LGLGGQLQNQ ASTNSILSLG SAPKYEHLIS 120 PNLHHSSSFG VQSPPQSSFF MTDPNQAFQD LQSQQQGPLF SNKQLHGLMQ LPDLQGTTNN 180 NSTSASSVSS SANNTNLFNL TFFPNANTSG SIINDHQFNM SGGNNNNQGT ATLYSTNSPV 240 SSQVGSGLSS LFGNSSMQQD NMSLSPHMSA TALLQKAAQM GSTTTTNASS SLLRGAEDLG 300 MRSSMENEHS NHLRGLMNSL ANGNASIFGS VKGNENNLGH FHNVVEEPKK MSQNLGVCFG 360 GSDKLTLDFL GVGGMVRNMN NSGFSQREQQ HSMGTMSPLD PKLEPARANQ HFGTSTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 2e-37 | C2H2 family protein |