PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92786.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 533aa MW: 58940.9 Da PI: 9.2208

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	25.4	3.7e-08	149	178	1	35
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgk 35 s+y+GV++++++grW+++I+d + k+++l + RDX92786.1 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLVY 178 78*******************......559999855 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MLDLNLNADW TESNRNGDSP LPLEKFPEGS RNQMAESGTS NSSVVNADGS SNGGGDEDSC 60 STRADDAGTF NFGILKVEGA NEFVTKELFP VSGGTKGGSA TSSFLTRNGL VDLSFDREGG 120 NGEMKMVQNQ NQTQQPAKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLVYYF 180 KHLLTKLVFE LVGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEDDL NQMKNLSKEE 240 FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KSMSKIVRCM FSTKRLAKVY 300 ISWLIRQRSR SCKVPSNTDL PFDFLEIRAY DKAAIKCNGR EAVTNFEPST YEGEMKSAAI 360 NEGGSQNLDL NLGIATPGPV PKENWGQLQF PSVLYNNTHG GHSSMMETNV NSGIGNPSLK 420 RMVVTEDRPL WNGMCPNFFP NEERAERISI GPSKGLPNWA WQTHGQVNAT PVPTFSAAAS 480 SGFSISPPFP STAIFPTRSM NSITQSLCFT SSSAPSSNTS EYYYQVKPPQ APP

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MLDLNLNADW TESNRNGDSP LPLEKFPEGS RNQMAESGTS NSSVVNADGS SNGGGDEDSC  60
STRADDAGTF NFGILKVEGA NEFVTKELFP VSGGTKGGSA TSSFLTRNGL VDLSFDREGG  120
NGEMKMVQNQ NQTQQPAKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLVYYF  180
KHLLTKLVFE LVGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEDDL NQMKNLSKEE  240
FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KSMSKIVRCM FSTKRLAKVY  300
ISWLIRQRSR SCKVPSNTDL PFDFLEIRAY DKAAIKCNGR EAVTNFEPST YEGEMKSAAI  360
NEGGSQNLDL NLGIATPGPV PKENWGQLQF PSVLYNNTHG GHSSMMETNV NSGIGNPSLK  420
RMVVTEDRPL WNGMCPNFFP NEERAERISI GPSKGLPNWA WQTHGQVNAT PVPTFSAAAS  480
SGFSISPPFP STAIFPTRSM NSITQSLCFT SSSAPSSNTS EYYYQVKPPQ APP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	2e-97	AP2 family protein