PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92733.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 832aa MW: 93222.2 Da PI: 7.0766

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.6e-05	241	263	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC +C++ F ++ n++rHir+ H RDX92733.1 241 KCDKCSREFCSPINYRRHIRVyH 263 7*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 832 aa Download sequence
LIHSKINIAA PPNFDNWADG EYEKHLYKTQ QVWNGNGQTS KVMSMETGWK KICATRNWLE 60 MMCGGGKWPE TEVRLWKSHQ RELATTMNRF AIGIIDAAAS CHNALRWCHS AAIEYFCLHT 120 PTATAEEEEN MPRGGVIKIL PLEQSSPHNP LCILARFQEQ QAEPYSDLMP IAKLKASGTP 180 DVKTEEKIDT IIRQAIGKEP FVSFPRTSDS PVQWIQLLHA LDPQEFPGWP LLSPVKVQLQ 240 KCDKCSREFC SPINYRRHIR VYHRLKKLDK DFTKTRDLLG AYWDKLSVEE AKKVVSFENV 300 VLEEVPGSSI LKSLTTLIQN QGFYSLPQYY LMAGAALLDI VQSRPSSFPI SSLELFSVLD 360 DASEKTCLCG TAVSMQRFVF DGEAAKIGLE PKNLVACTSF LLEQNLVKAW LADKDAEALR 420 CQKQLVEEEE AAQKRQADIM ERKRQKKLRQ KEQKAREQRD KAEAEIKGSI DSTVKALSQA 480 EASLDTYNFE AHNPNAFVEN TDSHVPFQCP DTNEEINGDV HSEYDSVTDQ NIERRSVHGH 540 KNQRPAVARQ QGLPKSQWAV ANGLHTNQNS PMSKLEVIQK YGTHCDQKAS AIANGSKVWS 600 RKPKTEIDKV VSKFIKEKES DEVKSQEVLI GSISVNLSNV VASQEDCMVE NVTKQNSSRD 660 KPIKTDFVMS GNNRPTVRLW RPVSRLENKD PFPVQSGGAE VDAVHGNGQN LSGPSSLRVC 720 GTDDGDIGFE KYFSHLEGRA DPGSFQFSTH AAKAFLAQRW KEAISSEHVK LVVSHDSEPS 780 GCQEEIQDSK LTASQSSDVD RSNIAANADN RVPKSKPRLK KSEKGTKIND DS

Sequence ? help Back to Top

Protein Sequence Length: 832 aa Download sequence

LIHSKINIAA PPNFDNWADG EYEKHLYKTQ QVWNGNGQTS KVMSMETGWK KICATRNWLE  60
MMCGGGKWPE TEVRLWKSHQ RELATTMNRF AIGIIDAAAS CHNALRWCHS AAIEYFCLHT  120
PTATAEEEEN MPRGGVIKIL PLEQSSPHNP LCILARFQEQ QAEPYSDLMP IAKLKASGTP  180
DVKTEEKIDT IIRQAIGKEP FVSFPRTSDS PVQWIQLLHA LDPQEFPGWP LLSPVKVQLQ  240
KCDKCSREFC SPINYRRHIR VYHRLKKLDK DFTKTRDLLG AYWDKLSVEE AKKVVSFENV  300
VLEEVPGSSI LKSLTTLIQN QGFYSLPQYY LMAGAALLDI VQSRPSSFPI SSLELFSVLD  360
DASEKTCLCG TAVSMQRFVF DGEAAKIGLE PKNLVACTSF LLEQNLVKAW LADKDAEALR  420
CQKQLVEEEE AAQKRQADIM ERKRQKKLRQ KEQKAREQRD KAEAEIKGSI DSTVKALSQA  480
EASLDTYNFE AHNPNAFVEN TDSHVPFQCP DTNEEINGDV HSEYDSVTDQ NIERRSVHGH  540
KNQRPAVARQ QGLPKSQWAV ANGLHTNQNS PMSKLEVIQK YGTHCDQKAS AIANGSKVWS  600
RKPKTEIDKV VSKFIKEKES DEVKSQEVLI GSISVNLSNV VASQEDCMVE NVTKQNSSRD  660
KPIKTDFVMS GNNRPTVRLW RPVSRLENKD PFPVQSGGAE VDAVHGNGQN LSGPSSLRVC  720
GTDDGDIGFE KYFSHLEGRA DPGSFQFSTH AAKAFLAQRW KEAISSEHVK LVVSHDSEPS  780
GCQEEIQDSK LTASQSSDVD RSNIAANADN RVPKSKPRLK KSEKGTKIND DS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	441	448	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-140	C2H2 family protein