PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX89910.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 298aa MW: 32936.2 Da PI: 8.2207

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX89910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1e-18	152	206	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k RDX89910.1 152 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLNLRARQVEVWFQNRRARTK 206 788899***********************************************98 PP
2	HD-ZIP_I/II	121.8	3.5e-39	152	241	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq++lLEesF+++++L+p++K++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l RDX89910.1 152 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 241 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGLDHDAGTS NSGLQLILGL ALTATPTSSP SISNKLDHDD HLALRPNSSY SSKSNNFIST 60 TINSEAEPLL TLALSRESFR QQVVKVPQNI GHNKVSCEDP LEQTSPHSAV SSFSSGRVKR 120 ERDLSCEEVE ATEIERLSSR ASDEEEDGAT ARKKLRLTKE QSALLEESFK QHSTLNPKQK 180 QALAKQLNLR ARQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLTDENRR LQKELQELKA 240 LKLAQPLYMP MPAATLTMCP SCERLGGGVN GGASPKTPFS MAPKPHFFNP FANPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	209	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-81	HD-ZIP family protein