PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX89321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 300aa MW: 32746.4 Da PI: 10.123 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.9 | 3.3e-31 | 223 | 280 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ +dp ++++tYegeH+h RDX89321.1 223 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 280 9************************9888****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MAVELMGFPK LEDQKAIQEA ASEGLKGMEH LIRILSHQPS HLNTDLTDVT VSKFKKLISL 60 LNRTGHARFR RAPLQLPPPP PPPPPHFASP PPLPHPPASV TLDFTNPHNT VLNSNAKSVE 120 LEFSKDAAFS VSSNSSFMSS AITGDGSVSN GKQGPSIFLA PPPPASSAGK PPPFKKRCHE 180 HREHSDDVSG STKCHCVKRR KNRVKKTVRV PAISSKIADI PPDEYSWRKY GQKPIKGSPY 240 PRGYYKCSTV RGCPARKHVE RAPDDPAMLI VTYEGEHRHA VQAAMQENAA GVVGLVFEST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 3e-95 | WRKY family protein |