PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87737.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Protein Properties

Length: 484aa MW: 54486.8 Da PI: 6.4163

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.8	1.1e-14	30	118	1	97
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ffkv + +l l++p +f + +++ +k+++l+d+sg+ W+vk+ +k g++ +++GW+ F ++gLk+g +vF ++++ f vk++ RDX87737.1 30 FFKVIAKQEYL--TTLYIPPDFSCTVsDLV---NKKIILNDSSGQHWKVKV--SKVNGSFAFEEGWNVFSLDHGLKVGYLLVFNYIKDLHF--DVKIY 118 66777444444..459****65555666...468***********..999999************************987666..77776 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MGRKEHRVCA ACTHNCLLFH QTKQTSPTSF FKVIAKQEYL TTLYIPPDFS CTVSDLVNKK 60 IILNDSSGQH WKVKVSKVNG SFAFEEGWNV FSLDHGLKVG YLLVFNYIKD LHFDVKIYDI 120 SACEKLDFSK KGNQKKRSRG RSGSPVRDDI LVRQGPNALV VSQLHVPKVK SQQNEVDLVE 180 TQNSKEGAQL MCISEHCEDP CYSTSLEFDQ SHGVDGTMKI ANRDSKVSDV DYGTHIHQND 240 AIVCKDTMVE AILDIGATLD ISELEMSGRN NSPGEADKSK HDKTSTLELE EKEEKESIMF 300 NKEAQECQFA EGLGTTKFNG ISNLLDAHIH NVPVDMTPKL CSSMDKLNVT GLPKETKGEL 360 GHCSESSDTF DQDNESLSNN TAILSCVVPN DNIYLKLPKC LALSGRVKVF QQRQMVVYLR 420 DPVRRLWPVF YHEQPQLPIL AHGWFDFSRA NNIEPEDVCI FEAEVEPESK SKSKRILAVR 480 IVHK

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MGRKEHRVCA ACTHNCLLFH QTKQTSPTSF FKVIAKQEYL TTLYIPPDFS CTVSDLVNKK  60
IILNDSSGQH WKVKVSKVNG SFAFEEGWNV FSLDHGLKVG YLLVFNYIKD LHFDVKIYDI  120
SACEKLDFSK KGNQKKRSRG RSGSPVRDDI LVRQGPNALV VSQLHVPKVK SQQNEVDLVE  180
TQNSKEGAQL MCISEHCEDP CYSTSLEFDQ SHGVDGTMKI ANRDSKVSDV DYGTHIHQND  240
AIVCKDTMVE AILDIGATLD ISELEMSGRN NSPGEADKSK HDKTSTLELE EKEEKESIMF  300
NKEAQECQFA EGLGTTKFNG ISNLLDAHIH NVPVDMTPKL CSSMDKLNVT GLPKETKGEL  360
GHCSESSDTF DQDNESLSNN TAILSCVVPN DNIYLKLPKC LALSGRVKVF QQRQMVVYLR  420
DPVRRLWPVF YHEQPQLPIL AHGWFDFSRA NNIEPEDVCI FEAEVEPESK SKSKRILAVR  480
IVHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	1e-10	B3 family protein