PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX83008.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 443aa MW: 47110.8 Da PI: 8.5697

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX83008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.8	9.7e-39	124	239	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ RDX83008.1 124 PAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaphtfhg 222 56799****************************************************************999888888888886655555556666666 PP TCP 89 ................k 89 + RDX83008.1 223 tlalshhpyeeafqhtA 239 55555555543333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MEISDLQNNN KQSSSNTNNT GGSSSGTTTH PHPHPHPHPH PHHHQQQQQS SSSHLVVPFD 60 GRPNPPSPFI SSSTSSSSNS SSSSTSSASA STHLIDASLA IATRSDDSAK KTQQLSAAAV 120 TAAPAPKRST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPA 180 IIAATGTGTI PANFSTLNVS LRSSGSTLSA PPSKSAPHTF HGTLALSHHP YEEAFQHTAL 240 LGFHPHHQQQ QQLLSADQIA EALPSGGGDS SDNYLRKRYR EDLFKDDNIN SQSQNESGDG 300 SSPKTPNLQL PKQQQQQQQN EVVSGLLRPS NLLPGTAMWA VAPGPASGPP GSTIWMLPVT 360 AASSSSSSSA SSTSVSATSE TPMWPFPQTG FMPRFNLPGS LEFQGARAGS LQLGSMLMPQ 420 QPSQHLGLAM SDSNMVWFWS KGT

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MEISDLQNNN KQSSSNTNNT GGSSSGTTTH PHPHPHPHPH PHHHQQQQQS SSSHLVVPFD  60
GRPNPPSPFI SSSTSSSSNS SSSSTSSASA STHLIDASLA IATRSDDSAK KTQQLSAAAV  120
TAAPAPKRST KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI EWLLQQAEPA  180
IIAATGTGTI PANFSTLNVS LRSSGSTLSA PPSKSAPHTF HGTLALSHHP YEEAFQHTAL  240
LGFHPHHQQQ QQLLSADQIA EALPSGGGDS SDNYLRKRYR EDLFKDDNIN SQSQNESGDG  300
SSPKTPNLQL PKQQQQQQQN EVVSGLLRPS NLLPGTAMWA VAPGPASGPP GSTIWMLPVT  360
AASSSSSSSA SSTSVSATSE TPMWPFPQTG FMPRFNLPGS LEFQGARAGS LQLGSMLMPQ  420
QPSQHLGLAM SDSNMVWFWS KGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-73	TCP family protein