PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81738.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 318aa MW: 36409.1 Da PI: 7.9602

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	1.9e-05	153	172	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ RDX81738.1 153 FACSICSKTFNRYNNMQMHM 172 78*****************9 PP
2	zf-C2H2	16.2	3e-05	237	259	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ RDX81738.1 237 FMCRKCGKTFAVKGDWRTHEKNC 259 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MGLMECNVED NRNLYLHAPT FIEWLKPCSS PPSYLNSNTI IPSSPSSYSS TRNEFVQETI 60 QFLPILSEKA SNYEASDHGV KEERVEQVAV ALHIGLPDTK GHDEVGDDHE KVIFHVKEEE 120 ESLKRSFHGC SFNQERRFWI PTPAQILVGP MQFACSICSK TFNRYNNMQM HMWGHGSEFR 180 KGPDSLKGTQ PAAMLRLPCY CCAQGCKNNI NHPRAKPLKD FRTLQTHYKR KHGTKPFMCR 240 KCGKTFAVKG DWRTHEKNCG KLWYCTCGSD FKHKRSLKDH IRSFGKGHSP HPAFEAFEDE 300 KECITASDED EVNNAHHT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	126	ESLKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-124	C2H2 family protein