PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX80182.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 28100.4 Da PI: 6.5169 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45 | 2.4e-14 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W ++Ed++l v +lG ++W++ a+ g++R++k+c++rw +yl RDX80182.1 8 KGTWLQDEDKQLTSFVLRLGERRWDSLAKLAGLRRSGKSCRLRWMNYL 55 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.3 | 7.2e-18 | 62 | 106 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+++ eE++l+ ++ +qlG++ W++Iar+++ gRt++++k++w+++l RDX80182.1 62 GPFSVEEEQLIFQLQQQLGNK-WAKIARKLP-GRTDNEIKNYWRTHL 106 89*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MQGEHLRKGT WLQDEDKQLT SFVLRLGERR WDSLAKLAGL RRSGKSCRLR WMNYLRPNLK 60 HGPFSVEEEQ LIFQLQQQLG NKWAKIARKL PGRTDNEIKN YWRTHLRKRA QVQQEVSRDF 120 KYNMESTTQD FNQKSIDMVS KDYTGIFCYR DSEWETMDSS IDTLPLSNWE LRSSPYESRI 180 LNWIAELQNG YGEKEHDCNS TGTFNYNPQE FAEGCDSWDC SGSLWEMNYD DTLFSKC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 4e-48 | MYB family protein |