PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX78884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | FAR1 | ||||||||
Protein Properties | Length: 170aa MW: 20353.6 Da PI: 10.0586 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.2 | 6e-09 | 41 | 131 | 9 | 90 |
FAR1 9 evGFsvrkskskks......krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 + GFs+r+++ +k ++ i+kr+fvC + + ++ k +++++r+++++r++ ak+ +k++ +++w v+ +++ nHe++ RDX78884.1 41 KSGFSIRRDHIYKCskseskENPLGIYKREFVCHCVDNVKHCKVIESERQRNKKSSRCNYSAKMWFSKRRigfEEQWIVACFNNSNNHEFF 131 67******999887554443333459*********9999999988899999******************99999**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MIFKERNGIV EYKSSFCLNL RTLISRFHIK GKYLTMMKML KSGFSIRRDH IYKCSKSESK 60 ENPLGIYKRE FVCHCVDNVK HCKVIESERQ RNKKSSRCNY SAKMWFSKRR IGFEEQWIVA 120 CFNNSNNHEF FYDKEVQYLY AYHDIPIGDQ NRILLWLKAG CPRNSHNKSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 2e-20 | FAR1 family protein |