PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX78826.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 652aa MW: 70451.7 Da PI: 9.6914

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX78826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.4e-05	167	189	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H RDX78826.1 167 FICEVCNKGFQREQNLQLHRRGH 189 89*******************88 PP
2	zf-C2H2	11.7	0.0008	243	265	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ RDX78826.1 243 WKCDKCSKKYAVQSDWKAHSKTC 265 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MRKDKAEKKT PPPLKIILGA QALHNTLHAT TEGKKDLNPS QPNTAQRVSE SFFALSMSVT 60 LNGNSTVHSA SAEFQTNSVI HPRPINHQMA ASSSSASLFG FREEDQNQMK QQHSLTPSSS 120 TTPAAPPPQK KKRNQPGTPC NSLNSISNPD AEVIALSPKT LMATNRFICE VCNKGFQREQ 180 NLQLHRRGHN LPWKLKQKTT KEPKRKVYLC PEPTCVHHDP SRALGDLTGI KKHYSRKHGE 240 KKWKCDKCSK KYAVQSDWKA HSKTCGTREY RCDCGTLFSR RDSFITHRAF CDALAQESAR 300 QPPNLSGGIG SHLYGATSMA LNLSQVGSQI SNMQDPNAQQ TELLRLGGAA TRTGQFDHIL 360 GSPFRSSQQP FFISEPNQNY HPDQQGLVPN KPFQQGLMQL SDHHNGMNNS PFNLPFLSSN 420 SNTNTSNVTF SEHFNNANGG GNNNNNNNEG TNFFTTSSAP SLFSNSNNGG NAMCHMSATA 480 LLQKAAQMGA TSSNSTASLL KSFGSASSSS GSKSEHRPLV ANANYGAIFG GNEQSNSNLQ 540 DLMNSFAVSG NSSIFEGGSS GGFSVAGFEA YDHSNREAKV HAMSGSDRLT RDFLGVGQIV 600 RGMSGSGGVS QREQHGFNLT SLDPETNNNN NHNNNNAAPS GQSFGGGGGN FQ

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MRKDKAEKKT PPPLKIILGA QALHNTLHAT TEGKKDLNPS QPNTAQRVSE SFFALSMSVT  60
LNGNSTVHSA SAEFQTNSVI HPRPINHQMA ASSSSASLFG FREEDQNQMK QQHSLTPSSS  120
TTPAAPPPQK KKRNQPGTPC NSLNSISNPD AEVIALSPKT LMATNRFICE VCNKGFQREQ  180
NLQLHRRGHN LPWKLKQKTT KEPKRKVYLC PEPTCVHHDP SRALGDLTGI KKHYSRKHGE  240
KKWKCDKCSK KYAVQSDWKA HSKTCGTREY RCDCGTLFSR RDSFITHRAF CDALAQESAR  300
QPPNLSGGIG SHLYGATSMA LNLSQVGSQI SNMQDPNAQQ TELLRLGGAA TRTGQFDHIL  360
GSPFRSSQQP FFISEPNQNY HPDQQGLVPN KPFQQGLMQL SDHHNGMNNS PFNLPFLSSN  420
SNTNTSNVTF SEHFNNANGG GNNNNNNNEG TNFFTTSSAP SLFSNSNNGG NAMCHMSATA  480
LLQKAAQMGA TSSNSTASLL KSFGSASSSS GSKSEHRPLV ANANYGAIFG GNEQSNSNLQ  540
DLMNSFAVSG NSSIFEGGSS GGFSVAGFEA YDHSNREAKV HAMSGSDRLT RDFLGVGQIV  600
RGMSGSGGVS QREQHGFNLT SLDPETNNNN NHNNNNAAPS GQSFGGGGGN FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-102	C2H2 family protein