PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX78466.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 351aa MW: 39327.6 Da PI: 4.6662

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX78466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.5	1.5e-10	275	315	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq RDX78466.1 275 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVNYVKFLQ 315 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MEPVGAFPDG EWDCFRRMFA SEEHDFTLQF PLLLDGADEL NIVTQQQQLM FCAGENERMF 60 YSLDAHNSNL QYISQESSYS SNCSGDDTVF IDNPGSANYY FGYPDHVLAN NACVDERHFS 120 SFVPSLITDI VTEDSVKLCE DVGSETLQNS QYNQMEAIVF PTKQLQLKRK LDVPAQDKIN 180 NRSENHKKKP RLLKEGQGCM KNAWSKKNQK DGEEAEETNA GSDGQSSSSN MSEDDNACKE 240 NSGGATSGSK SLLNSNGKTR ASRGSATDPQ SLYARKRRER INERLRILQN LVPNGTKVDI 300 STMLEEAVNY VKFLQLQIKL LSSDDLWMYA PLAYNGLDIG FNLNSKNSLP L

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MEPVGAFPDG EWDCFRRMFA SEEHDFTLQF PLLLDGADEL NIVTQQQQLM FCAGENERMF  60
YSLDAHNSNL QYISQESSYS SNCSGDDTVF IDNPGSANYY FGYPDHVLAN NACVDERHFS  120
SFVPSLITDI VTEDSVKLCE DVGSETLQNS QYNQMEAIVF PTKQLQLKRK LDVPAQDKIN  180
NRSENHKKKP RLLKEGQGCM KNAWSKKNQK DGEEAEETNA GSDGQSSSSN MSEDDNACKE  240
NSGGATSGSK SLLNSNGKTR ASRGSATDPQ SLYARKRRER INERLRILQN LVPNGTKVDI  300
STMLEEAVNY VKFLQLQIKL LSSDDLWMYA PLAYNGLDIG FNLNSKNSLP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33880.1	8e-42	bHLH family protein