PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX78254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 303aa MW: 33488.2 Da PI: 10.1903 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.7 | 1.8e-31 | 232 | 289 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ RDX78254.1 232 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHT 289 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MAVELVMGYR NDNFAEENAV REAASGLESV EKLIRLLSQT QQYQHTMEIE TDYRAVADVA 60 VSKFKKVISL LGRTRTGHAR FRRAPVAPPP PEPRVYRATP LQQIPPPTDH PLIPKKGLLE 120 RKDSSKTIHF SYSNSFVSSL TGDTDTKQPC SSSPATPFQI TNLSQSHVSS AGKPPLSSSS 180 LKRKCSSDNL GSAKCASSSA RCHCSKKSRK MRLKRVVRVP AISLKMADIP PDDYSWRKYG 240 QKPIKGSPHP RGYYKCSSVR GCPARKHVER ALDDPAMLVV TYEGEHNHTL SATEATNLIL 300 ESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 2e-74 | WRKY family protein |