PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX77178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 23488.5 Da PI: 8.4897 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1e-17 | 51 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+e+r+p +k++r++lg+f tae+Aa+a++ a+ +l+g RDX77178.1 51 PVYRGVRKRD-SGKWVCEVREP---NKKTRIWLGTFLTAEMAARAHDVAAIALRG 101 68*****999.7******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MFSINRFSDR RATSIAPGGS RQALSNEEVF LAASHPKKRA GRKKFRETRH PVYRGVRKRD 60 SGKWVCEVRE PNKKTRIWLG TFLTAEMAAR AHDVAAIALR GRSACLNFAD STWRLPVPAT 120 AEARDIQKAA AEAAEAFRPG MESESSNRGK DDAASASVVA ETAMEHGEEE GVVPEFLRDM 180 VLMSPAHCFG SEYEYADVEI DDTEVSLWRK K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 3e-61 | ERF family protein |